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BDBM50278078

E3L050825
Internal ID: BDB050825
Activity data available Local docking-ready structure
Dock with P37231 Dock with Q07869
Structure
/e3_file/ligand_db/generated/BDB050825/BDB050825.sdf
Basic Properties
Compound ID
E3L050825
Internal ID
BDB050825
Molecular formula
C18H29IO4
Molecular weight
436.330000
Exact mass
436.111057
XLogP
4.8949
TPSA
63.6000
HBA / HBD
3 / 1
Rotatable bonds
13
Heavy atoms / rings
23 / 1
Activity summary
EC50 unknown 30.00000000 nM
2 activity record(s) imported
InChIKey
AEIHLYLFNBJVQX-KBXCAEBGSA-N
SMILES
CCCCCCC[C@H]1C(=O)C=C(I)[C@@H]1OCCCCCC(=O)O
Aliases
BDBM50278078 (preferred) (1''R*,5''R*)-6-(5-Heptyl-2-Iodo-4-oxocyclopent-2-enyloxy)hexanoic Acid (source_name) BDBM50278078 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50278078 medium
; target=Peroxisome proliferator-activated receptor gamma
Q07869 PPARA;NR1C1;PPAR
Peroxisome proliferator-activated receptor alpha		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50278078 medium
; target=Peroxisome proliferator-activated receptor alpha
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50278078 Open - 10.1016/j.bmcl.2009.02.072 PMID: 19275963
PubChem CID15984029 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCCCCC[C@H]1C(=O)C=C(I)[C@@H]1OCCCCCC(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB050825/BDB050825.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB050825/BDB050825.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB050825/BDB050825.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB050825/BDB050825.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB050825/BDB050825.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor alpha
Q07869
E3 ligase component 		BindingDB:BDBM50278078 EC50 1000 nM Moderate DOI: 10.1016/j.bmcl.2009.02.072
PMID: 19275963 		1
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50278078 EC50 30 nM High DOI: 10.1016/j.bmcl.2009.02.072
PMID: 19275963 		1