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BDBM50279231

E3L050838
Internal ID: BDB050838
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB050838/BDB050838.sdf
Basic Properties
Compound ID
E3L050838
Internal ID
BDB050838
Molecular formula
C45H56Cl3N3O5
Molecular weight
825.318000
Exact mass
823.328555
XLogP
12.6268
TPSA
111.7300
HBA / HBD
4 / 3
Rotatable bonds
7
Heavy atoms / rings
56 / 5
Activity summary
Ki unknown 1900.00000000 nM
1 activity record(s) imported
InChIKey
ZLMDAQVTXMKJIE-UHFFFAOYSA-N
SMILES
O=C(O)c1[nH]c2cc(Cl)ccc2c1C1C(=O)NCCCCCCCCCCCCCCCCCCCC(=O)N1Cc1ccc(OCc2ccc(Cl)c(Cl)c2)cc1
Aliases
BDBM50279231 (preferred) 6-chloro-3-[1-[[4-[(3,4-dichlorophenyl)methoxy]phenyl]methyl]-3,24-dioxo-1,4-diazacyclotetracos-2-yl]-1H-indole-2-carboxylic acid (source_name) BDBM50279231 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50279231 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50279231 Open - 10.1021/acsmedchemlett.7b00219 PMID: 29057045
PubChem CID145953588 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)c1[nH]c2cc(Cl)ccc2c1C1C(=O)NCCCCCCCCCCCCCCCCCCCC(=O)N1Cc1ccc(OCc2ccc(Cl)c(Cl)c2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB050838/BDB050838.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB050838/BDB050838.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB050838/BDB050838.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB050838/BDB050838.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB050838/BDB050838.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50279231 Ki 1900 nM Low DOI: 10.1021/acsmedchemlett.7b00219
PMID: 29057045 		1