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BDBM50296712

E3L051333
Internal ID: BDB051333
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB051333/BDB051333.sdf
Basic Properties
Compound ID
E3L051333
Internal ID
BDB051333
Molecular formula
C28H29N7O4
Molecular weight
527.585000
Exact mass
527.228102
XLogP
3.4325
TPSA
139.8200
HBA / HBD
10 / 2
Rotatable bonds
9
Heavy atoms / rings
39 / 5
Activity summary
EC50 unknown 6130.00000000 nM
1 activity record(s) imported
InChIKey
BNHDABHPDDHZAL-UHFFFAOYSA-N
SMILES
CC(Cc1ccc(Oc2cc(N3CCN(c4ncccn4)CC3)nc(N)n2)cc1)(Oc1ccccc1)C(=O)O
Aliases
BDBM50296712 (preferred) 3-{4-[2-Amino-6-(4-pyrimidin-2-yl-piperazin-1-yl)-pyrimidin-4-yloxy]-phenyl}-2-methyl-2-phenoxy-propionic acid (source_name) BDBM50296712 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50296712 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50296712 Open - 10.1016/j.bmc.2009.05.082 PMID: 19574056
PubChem CID25262090 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(Cc1ccc(Oc2cc(N3CCN(c4ncccn4)CC3)nc(N)n2)cc1)(Oc1ccccc1)C(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051333/BDB051333.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051333/BDB051333.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051333/BDB051333.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051333/BDB051333.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051333/BDB051333.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50296712 EC50 6130 nM Low DOI: 10.1016/j.bmc.2009.05.082
PMID: 19574056 		1