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BDBM50306189

E3L051613
Internal ID: BDB051613
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB051613/BDB051613.sdf
Basic Properties
Compound ID
E3L051613
Internal ID
BDB051613
Molecular formula
C22H25N5O2
Molecular weight
391.475000
Exact mass
391.200825
XLogP
2.0824
TPSA
93.2500
HBA / HBD
4 / 2
Rotatable bonds
5
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 22.00000000 nM
1 activity record(s) imported
InChIKey
NWAGWYQOJGTXLT-UHFFFAOYSA-N
SMILES
CN1CCCC(C(=O)NCc2ccc(-n3cc4cccc(C(N)=O)c4n3)cc2)C1
Aliases
BDBM50306189 (preferred) 2-(4-((1-methylpiperidine-3-carboxamido)methyl)phenyl)-2H-indazole-7-carboxamide (source_name) BDBM50306189 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50306189 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50306189 Open - 10.1016/j.bmcl.2009.11.127 PMID: 20007017
PubChem CID46226352 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCCC(C(=O)NCc2ccc(-n3cc4cccc(C(N)=O)c4n3)cc2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051613/BDB051613.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051613/BDB051613.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051613/BDB051613.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051613/BDB051613.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051613/BDB051613.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306189 IC50 22 nM High DOI: 10.1016/j.bmcl.2009.11.127
PMID: 20007017 		1