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BDBM50306210

E3L051634
Internal ID: BDB051634
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB051634/BDB051634.sdf
Basic Properties
Compound ID
E3L051634
Internal ID
BDB051634
Molecular formula
C16H16N4O
Molecular weight
280.331000
Exact mass
280.132411
XLogP
1.8438
TPSA
72.9400
HBA / HBD
3 / 2
Rotatable bonds
4
Heavy atoms / rings
21 / 3
Activity summary
IC50 unknown 3.80000000 nM
3 activity record(s) imported
InChIKey
BNTVUFYBGXHEDO-UHFFFAOYSA-N
SMILES
CNCc1ccc(-n2cc3cccc(C(N)=O)c3n2)cc1
Aliases
BDBM50306210 (preferred) 2-(4-((methylamino)methyl)phenyl)-2H-indazole-7-carboxamide (source_name) BDBM50306210 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50306210 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50306210 Open - 10.1021/jm5018237; 10.1016/j.bmcl.2009.11.127; 10.1021/jm901188v PMID: 25761096; 20007017; 19873981
PubChem CID44549775 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNCc1ccc(-n2cc3cccc(C(N)=O)c3n2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051634/BDB051634.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051634/BDB051634.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051634/BDB051634.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051634/BDB051634.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051634/BDB051634.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306210 IC50 5 nM Very high DOI: 10.1016/j.bmcl.2009.11.127
PMID: 20007017 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306210 IC50 3.8 nM Very high DOI: 10.1021/jm901188v
PMID: 19873981 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306210 IC50 3.8 nM Very high DOI: 10.1021/jm5018237
PMID: 25761096 		1