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BDBM50306259

E3L051653
Internal ID: BDB051653
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB051653/BDB051653.sdf
Basic Properties
Compound ID
E3L051653
Internal ID
BDB051653
Molecular formula
C17H20N2O2
Molecular weight
284.359000
Exact mass
284.152478
XLogP
2.0460
TPSA
49.4100
HBA / HBD
2 / 1
Rotatable bonds
1
Heavy atoms / rings
21 / 4
Activity summary
IC50 unknown 11.00000000 nM
2 activity record(s) imported
InChIKey
KFIKZIDBFSBPOB-UHFFFAOYSA-N
SMILES
O=C1NCC2c3c(cccc31)CCN2C(=O)C1CCCC1
Aliases
BDBM50306259 (preferred) 2-(Cyclopentanecarbonyl)-2,11-diazatricyclo[7.3.1.05,13]trideca-5(13),6,8-trien-10-one (source_name) BDBM50306259 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50306259 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50306259 Open - 10.1016/j.bmcl.2009.12.002 PMID: 20015648
PubChem CID46226100 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1NCC2c3c(cccc31)CCN2C(=O)C1CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051653/BDB051653.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051653/BDB051653.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051653/BDB051653.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051653/BDB051653.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051653/BDB051653.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306259 IC50 11 nM High DOI: 10.1016/j.bmcl.2009.12.002
PMID: 20015648 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50306259 EC50 550 nM Moderate DOI: 10.1016/j.bmcl.2009.12.002
PMID: 20015648 		1