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BDBM50309350

E3L051806
Internal ID: BDB051806
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB051806/BDB051806.sdf
Basic Properties
Compound ID
E3L051806
Internal ID
BDB051806
Molecular formula
C23H23Cl2FN4O2
Molecular weight
477.367000
Exact mass
476.118210
XLogP
3.9746
TPSA
60.8200
HBA / HBD
3 / 1
Rotatable bonds
4
Heavy atoms / rings
32 / 5
Activity summary
IC50 unknown 1.00000000 nM
1 activity record(s) imported
InChIKey
WIUDIZPAQFOMCD-UHFFFAOYSA-N
SMILES
O=C(c1cc(Cc2c[nH]c(=O)c3cc(Cl)c(Cl)n23)ccc1F)N1CCC(N2CCC2)CC1
Aliases
BDBM50309350 (preferred) 4-(3-(4-(azetidin-1-yl)piperidine-1-carbonyl)-4-fluorobenzyl)-6,7-dichloropyrrolo[1,2-a]pyrazin-1(2H)-one (source_name) BDBM50309350 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50309350 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50309350 Open - 10.1016/j.bmcl.2009.12.026 PMID: 20031401
PubChem CID46229995 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(c1cc(Cc2c[nH]c(=O)c3cc(Cl)c(Cl)n23)ccc1F)N1CCC(N2CCC2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051806/BDB051806.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051806/BDB051806.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051806/BDB051806.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051806/BDB051806.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051806/BDB051806.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50309350 IC50 1 nM Very high DOI: 10.1016/j.bmcl.2009.12.026
PMID: 20031401 		1