< Back to small molecule database

BDBM50311800

E3L051928
Internal ID: BDB051928
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB051928/BDB051928.sdf
Basic Properties
Compound ID
E3L051928
Internal ID
BDB051928
Molecular formula
C34H33Cl3F2N2O2
Molecular weight
646.005000
Exact mass
644.157568
XLogP
8.7958
TPSA
41.5700
HBA / HBD
3 / 1
Rotatable bonds
10
Heavy atoms / rings
43 / 6
Activity summary
IC50 unknown 1.10000000 nM
2 activity record(s) imported
InChIKey
ZWGGBJBZHGMPEX-RNWIMVQKSA-N
SMILES
O=C(C1=C(c2ccc(CCCOc3c(F)ccc(F)c3Cl)cc2)C[C@H]2CCC[C@H]1N2)N(Cc1cccc(Cl)c1Cl)C1CC1
Aliases
BDBM50311800 (preferred) (1R,5R)-3-(4-(3-(2-chloro-3,6-difluorophenoxy)propyl)phenyl)-N-cyclopropyl-N-(2,3-dichlorobenzyl)-9-azabicyclo[3.3.1]non-2-ene-2-carboxamide (source_name) BDBM50311800 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50311800 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50311800 Open - 10.1016/j.bmcl.2009.09.104 PMID: 19853442
PubChem CID46880054 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(C1=C(c2ccc(CCCOc3c(F)ccc(F)c3Cl)cc2)C[C@H]2CCC[C@H]1N2)N(Cc1cccc(Cl)c1Cl)C1CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051928/BDB051928.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051928/BDB051928.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051928/BDB051928.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051928/BDB051928.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051928/BDB051928.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component 		BindingDB:BDBM50311800 IC50 113 nM Moderate DOI: 10.1016/j.bmcl.2009.09.104
PMID: 19853442 		1
Renin
P00797
E3 ligase component 		BindingDB:BDBM50311800 IC50 1.1 nM Very high DOI: 10.1016/j.bmcl.2009.09.104
PMID: 19853442 		1