< Back to small molecule database

BDBM50311803

E3L051931
Internal ID: BDB051931
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB051931/BDB051931.sdf
Basic Properties
Compound ID
E3L051931
Internal ID
BDB051931
Molecular formula
C33H32Cl3F2N3O2
Molecular weight
646.993000
Exact mass
645.152817
XLogP
7.2151
TPSA
53.6000
HBA / HBD
4 / 2
Rotatable bonds
10
Heavy atoms / rings
43 / 6
Activity summary
IC50 unknown 0.40000000 nM
2 activity record(s) imported
InChIKey
SXZFQYPWEANJGQ-RBISFHTESA-N
SMILES
O=C(C1=C(c2ccc(CCCOc3c(F)ccc(F)c3Cl)cc2)C[C@H]2CNC[C@H]1N2)N(Cc1cccc(Cl)c1Cl)C1CC1
Aliases
BDBM50311803 (preferred) (1S,5S)-7-(4-(3-(2-chloro-3,6-difluorophenoxy)propyl)phenyl)-N-cyclopropyl-N-(2,3-dichlorobenzyl)-3,9-diazabicyclo[3.3.1]non-6-ene-6-carboxamide (source_name) BDBM50311803 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50311803 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50311803 Open - 10.1016/j.bmcl.2009.09.104 PMID: 19853442
PubChem CID46880052 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(C1=C(c2ccc(CCCOc3c(F)ccc(F)c3Cl)cc2)C[C@H]2CNC[C@H]1N2)N(Cc1cccc(Cl)c1Cl)C1CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB051931/BDB051931.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB051931/BDB051931.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB051931/BDB051931.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB051931/BDB051931.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB051931/BDB051931.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50311803 IC50 36 nM High DOI: 10.1016/j.bmcl.2009.09.104
PMID: 19853442
1
Renin
P00797
E3 ligase component
BindingDB:BDBM50311803 IC50 0.4 nM Very high DOI: 10.1016/j.bmcl.2009.09.104
PMID: 19853442
1