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BDBM50316225

E3L052287
Internal ID: BDB052287
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB052287/BDB052287.sdf
Basic Properties
Compound ID
E3L052287
Internal ID
BDB052287
Molecular formula
C19H20N4O
Molecular weight
320.396000
Exact mass
320.163711
XLogP
2.5914
TPSA
72.9400
HBA / HBD
3 / 2
Rotatable bonds
3
Heavy atoms / rings
24 / 4
Activity summary
IC50 unknown 2.40000000 nM
3 activity record(s) imported
InChIKey
PCHKPVIQAHNQLW-AWEZNQCLSA-N
SMILES
NC(=O)c1cccc2cn(-c3ccc([C@H]4CCCNC4)cc3)nc12
Aliases
BDBM50316225 (preferred) (R)-2-(4-(piperidin-3-yl)phenyl)-2H-indazole-7-carboxamide (source_name) BDBM50316225 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50316225 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50316225 Open - 10.1021/jm901188v; 10.1021/jm5018237 PMID: 19873981; 25761096
PubChem CID24958199 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready NC(=O)c1cccc2cn(-c3ccc([C@H]4CCCNC4)cc3)nc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB052287/BDB052287.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB052287/BDB052287.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB052287/BDB052287.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB052287/BDB052287.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB052287/BDB052287.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50316225 IC50 2.4 nM Very high DOI: 10.1021/jm5018237
PMID: 25761096 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50316225 IC50 3.2 nM Very high DOI: 10.1021/jm901188v
PMID: 19873981 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50316225 IC50 2.4 nM Very high DOI: 10.1021/jm901188v
PMID: 19873981 		1