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BDBM50319572

E3L052527
Internal ID: BDB052527
Activity data available Local docking-ready structure
Dock with O14965
Structure
/e3_file/ligand_db/generated/BDB052527/BDB052527.sdf
Basic Properties
Compound ID
E3L052527
Internal ID
BDB052527
Molecular formula
C33H32N8O
Molecular weight
556.674000
Exact mass
556.269908
XLogP
7.0002
TPSA
103.8800
HBA / HBD
8 / 3
Rotatable bonds
9
Heavy atoms / rings
42 / 7
Activity summary
IC50 unknown 327.00000000 nM
1 activity record(s) imported
InChIKey
SBSYQSASKXLENU-UHFFFAOYSA-N
SMILES
CN1CCCC1CCNc1nccc(-c2cccnc2Oc2ccc(Nc3nc4ccccc4[nH]3)c3ccccc23)n1
Aliases
BDBM50319572 (preferred) N-(4-(3-(2-(2-(1-methylpyrrolidin-2-yl)ethylamino)pyrimidin-4-yl)pyridin-2-yloxy)naphthalen-1-yl)-1H-benzo[d]imidazol-2-amine (source_name) BDBM50319572 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O14965 AURKA;AIK;AIRK1;ARK1;AURA;AYK1;BTAK;IAK1;STK15;STK6
Aurora kinase A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50319572 medium
; target=Aurora kinase A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50319572 Open - 10.1021/jm100301x PMID: 20459125
PubChem CID24983299 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCCC1CCNc1nccc(-c2cccnc2Oc2ccc(Nc3nc4ccccc4[nH]3)c3ccccc23)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB052527/BDB052527.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB052527/BDB052527.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB052527/BDB052527.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB052527/BDB052527.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB052527/BDB052527.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Aurora kinase A
O14965
E3 ligase component 		BindingDB:BDBM50319572 IC50 327 nM Moderate DOI: 10.1021/jm100301x
PMID: 20459125 		1