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BDBM50322468

E3L052567
Internal ID: BDB052567
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB052567/BDB052567.sdf
Basic Properties
Compound ID
E3L052567
Internal ID
BDB052567
Molecular formula
C28H28F6N2O6S
Molecular weight
634.595000
Exact mass
634.157227
XLogP
7.2523
TPSA
100.0000
HBA / HBD
8 / 1
Rotatable bonds
16
Heavy atoms / rings
43 / 3
Activity summary
EC50 unknown 10300.00000000 nM
1 activity record(s) imported
InChIKey
PDDCQAHTKIBSGG-UHFFFAOYSA-N
SMILES
CCCCC(Sc1nc(OCCc2ccc(OC(F)(F)F)cc2)cc(OCCc2ccc(OC(F)(F)F)cc2)n1)C(=O)O
Aliases
BDBM50322468 (preferred) 2-(4,6-Bis(4-(trifluoromethoxy)phenethoxy)pyrimidin-2-ylthio)hexanoic acid (source_name) BDBM50322468 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50322468 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50322468 Open - 10.1021/jm1003073 PMID: 20503989
PubChem CID46837778 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCCC(Sc1nc(OCCc2ccc(OC(F)(F)F)cc2)cc(OCCc2ccc(OC(F)(F)F)cc2)n1)C(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB052567/BDB052567.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB052567/BDB052567.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB052567/BDB052567.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB052567/BDB052567.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB052567/BDB052567.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50322468 EC50 10300 nM Low DOI: 10.1021/jm1003073
PMID: 20503989 		1