< Back to small molecule database

BDBM50328876

E3L052785
Internal ID: BDB052785
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB052785/BDB052785.sdf
Basic Properties
Compound ID
E3L052785
Internal ID
BDB052785
Molecular formula
C34H39Cl3N2O5
Molecular weight
662.054000
Exact mass
660.192455
XLogP
6.5902
TPSA
80.2600
HBA / HBD
6 / 2
Rotatable bonds
13
Heavy atoms / rings
44 / 5
Activity summary
IC50 unknown 35.00000000 nM
1 activity record(s) imported
InChIKey
XQJYPYVXYANJRR-IPZQJPLYSA-N
SMILES
COCCc1ccc(Cl)c(CN(C(=O)[C@@H]2CNCC[C@@]2(O)c2ccc(OCCOc3c(Cl)cc(C)cc3Cl)cc2)C2CC2)c1
Aliases
BDBM50328876 (preferred) (3R,4S)-N-(2-chloro-5-(2-methoxyethyl)benzyl)-N-cyclopropyl-4-(4-(2-(2,6-dichloro-4-methylphenoxy)ethoxy)phenyl)-4-hydroxypiperidine-3-carboxamide (source_name) BDBM50328876 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50328876 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50328876 Open - 10.1016/j.bmcl.2010.08.086 PMID: 20843686
PubChem CID52945477 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCc1ccc(Cl)c(CN(C(=O)[C@@H]2CNCC[C@@]2(O)c2ccc(OCCOc3c(Cl)cc(C)cc3Cl)cc2)C2CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB052785/BDB052785.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB052785/BDB052785.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB052785/BDB052785.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB052785/BDB052785.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB052785/BDB052785.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50328876 IC50 35 nM High DOI: 10.1016/j.bmcl.2010.08.086
PMID: 20843686
1