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BDBM50339433

E3L053127
Internal ID: BDB053127
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB053127/BDB053127.sdf
Basic Properties
Compound ID
E3L053127
Internal ID
BDB053127
Molecular formula
C20H15ClN2O3
Molecular weight
366.804000
Exact mass
366.077120
XLogP
2.8228
TPSA
67.4800
HBA / HBD
3 / 1
Rotatable bonds
3
Heavy atoms / rings
26 / 4
Activity summary
IC50 > 200000.00000000 nM
1 activity record(s) imported
InChIKey
BVKZNDYFUCWGEK-UHFFFAOYSA-N
SMILES
O=C1c2ccccc2C(O)(c2ccc(Cl)cc2)N1Cc1cccc[n+]1[O-]
Aliases
BDBM50339433 (preferred) 2-((1-(4-Chlorophenyl)-1-hydroxy-3-oxoisoindolin-2-yl)methyl)pyridine-1-oxide (source_name) BDBM50339433 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50339433 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50339433 Open - 10.1021/jm1011929 PMID: 21314128
PubChem CID51350253 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1c2ccccc2C(O)(c2ccc(Cl)cc2)N1Cc1cccc[n+]1[O-] keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB053127/BDB053127.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB053127/BDB053127.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB053127/BDB053127.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB053127/BDB053127.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB053127/BDB053127.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50339433 IC50 >200000 nM Low DOI: 10.1021/jm1011929
PMID: 21314128 		1