< Back to small molecule database

BDBM50347754

E3L053427
Internal ID: BDB053427
Activity data available Local docking-ready structure
Dock with Q92630
Structure
/e3_file/ligand_db/generated/BDB053427/BDB053427.sdf
Basic Properties
Compound ID
E3L053427
Internal ID
BDB053427
Molecular formula
C13H13N3O3
Molecular weight
259.265000
Exact mass
259.095691
XLogP
0.8036
TPSA
63.1600
HBA / HBD
5 / 1
Rotatable bonds
1
Heavy atoms / rings
19 / 3
Activity summary
IC50 unknown 2200.00000000 nM
1 activity record(s) imported
InChIKey
CJNRNWLLZDWPDT-UHFFFAOYSA-N
SMILES
CNC1=NC(=Cc2ccc3c(c2)OCO3)C(=O)N1C
Aliases
BDBM50347754 (preferred) BDBM50347754 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92630 DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50347754 medium
; target=Dual specificity tyrosine-phosphorylation-regulated kinase 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50347754 Open - 10.1021/jm200274d PMID: 21615147
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC1=NC(=Cc2ccc3c(c2)OCO3)C(=O)N1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB053427/BDB053427.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB053427/BDB053427.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB053427/BDB053427.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB053427/BDB053427.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB053427/BDB053427.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component
BindingDB:BDBM50347754 IC50 2200 nM Low DOI: 10.1021/jm200274d
PMID: 21615147
1