< Back to small molecule database

BDBM50352906

E3L053703
Internal ID: BDB053703
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB053703/BDB053703.sdf
Basic Properties
Compound ID
E3L053703
Internal ID
BDB053703
Molecular formula
C26H31FN4O2
Molecular weight
450.558000
Exact mass
450.243104
XLogP
3.9185
TPSA
70.1300
HBA / HBD
3 / 2
Rotatable bonds
4
Heavy atoms / rings
33 / 5
Activity summary
IC50 unknown 116.00000000 nM
1 activity record(s) imported
InChIKey
LYOZSXVXVCFMQB-UHFFFAOYSA-N
SMILES
Cc1c(F)cccc1Cc1c(C(=O)N2CCNCC2)c2c[nH]c(=O)cc2n1C1CCCCC1
Aliases
BDBM50352906 (preferred) 1-cyclohexyl-2-[(3-fluoro-2-methylphenyl)methyl]-3-(piperazine-1-carbonyl)-5H-pyrrolo[3,2-c]pyridin-6-one (source_name) BDBM50352906 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50352906 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50352906 Open - 10.1016/j.bmcl.2011.06.112 PMID: 21840215
PubChem CID56668719 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1c(F)cccc1Cc1c(C(=O)N2CCNCC2)c2c[nH]c(=O)cc2n1C1CCCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB053703/BDB053703.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB053703/BDB053703.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB053703/BDB053703.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB053703/BDB053703.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB053703/BDB053703.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component 		BindingDB:BDBM50352906 IC50 116 nM Moderate DOI: 10.1016/j.bmcl.2011.06.112
PMID: 21840215 		1