< Back to small molecule database

BDBM50352924

E3L053721
Internal ID: BDB053721
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB053721/BDB053721.sdf
Basic Properties
Compound ID
E3L053721
Internal ID
BDB053721
Molecular formula
C27H27FN4O2
Molecular weight
458.537000
Exact mass
458.211804
XLogP
4.1178
TPSA
59.3900
HBA / HBD
4 / 1
Rotatable bonds
5
Heavy atoms / rings
34 / 5
Activity summary
IC50 unknown 4670.00000000 nM
1 activity record(s) imported
InChIKey
XHDCGEFSIZPOAO-UHFFFAOYSA-N
SMILES
COc1cnc2c(c1)c(C(=O)N1CCNCC1)c(Cc1cccc(F)c1C)n2-c1ccccc1
Aliases
BDBM50352924 (preferred) [2-(3-Fluoro-2-methyl-benzyl)-5-methoxy-1-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl]-piperazin-1-yl-methanone (source_name) BDBM50352924 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50352924 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50352924 Open - 10.1016/j.bmcl.2011.06.112 PMID: 21840215
PubChem CID56661825 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cnc2c(c1)c(C(=O)N1CCNCC1)c(Cc1cccc(F)c1C)n2-c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB053721/BDB053721.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB053721/BDB053721.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB053721/BDB053721.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB053721/BDB053721.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB053721/BDB053721.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50352924 IC50 4670 nM Low DOI: 10.1016/j.bmcl.2011.06.112
PMID: 21840215
1