< Back to small molecule database

BDBM50368240

E3L054263
Internal ID: BDB054263
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB054263/BDB054263.sdf
Basic Properties
Compound ID
E3L054263
Internal ID
BDB054263
Molecular formula
C34H50N6O6
Molecular weight
638.810000
Exact mass
638.379183
XLogP
2.8674
TPSA
165.7500
HBA / HBD
7 / 5
Rotatable bonds
13
Heavy atoms / rings
46 / 4
Activity summary
IC50 > 20000.00000000 nM
1 activity record(s) imported
InChIKey
GMHADIRIDUBUJL-QZLCNWOESA-N
SMILES
CN1CC[C@H]([C@H](O)[C@H](CC2CCCCC2)NC(=O)[C@H](Cc2cnc[nH]2)NC(=O)[C@H](Cc2ccccc2)NC(=O)OC(C)(C)C)C1=O
Aliases
BDBM50368240 (preferred) BDBM50368240 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50368240 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50368240 Open - 10.1021/jm00107a004 PMID: 2002469
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CC[C@H]([C@H](O)[C@H](CC2CCCCC2)NC(=O)[C@H](Cc2cnc[nH]2)NC(=O)[C@H](Cc2ccccc2)NC(=O)OC(C)(C)C)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB054263/BDB054263.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB054263/BDB054263.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB054263/BDB054263.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB054263/BDB054263.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB054263/BDB054263.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50368240 IC50 >20000 nM Low DOI: 10.1021/jm00107a004
PMID: 2002469
1