< Back to small molecule database

BDBM50387280

E3L054786
Internal ID: BDB054786
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB054786/BDB054786.sdf
Basic Properties
Compound ID
E3L054786
Internal ID
BDB054786
Molecular formula
C28H47N5O6
Molecular weight
549.713000
Exact mass
549.352634
XLogP
1.0747
TPSA
160.4500
HBA / HBD
8 / 4
Rotatable bonds
14
Heavy atoms / rings
39 / 2
Activity summary
IC50 unknown 1.40000000 nM
1 activity record(s) imported
InChIKey
IVUDLYCHNURAOH-ONTIZHBOSA-N
SMILES
COCOc1ccccc1N1CC(C)(C)N(C[C@H](N)[C@@H](O)C[C@H](C(=O)NCC(C)(C)C(N)=O)C(C)C)CC1=O
Aliases
BDBM50387280 (preferred) (2s,4s,5s)-5-Amino-4-hydroxy-2-isopropyl-6-[4-(2-methoxymethoxyphenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]hexanoic acid (2-carbamoyl-2-methylpropyl)amide (source_name) BDBM50387280 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50387280 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50387280 Open - 10.1016/j.bmcl.2012.05.092 PMID: 22726934
PubChem CID66645361 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCOc1ccccc1N1CC(C)(C)N(C[C@H](N)[C@@H](O)C[C@H](C(=O)NCC(C)(C)C(N)=O)C(C)C)CC1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB054786/BDB054786.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB054786/BDB054786.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB054786/BDB054786.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB054786/BDB054786.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB054786/BDB054786.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50387280 IC50 1.4 nM Very high DOI: 10.1016/j.bmcl.2012.05.092
PMID: 22726934
1