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4-((Dimethylamino)oxy)-4-oxobutanoic acid

E3L055033
Internal ID: BDB055033
Activity data available Local docking-ready structure
Dock with P41229
Structure
/e3_file/ligand_db/generated/BDB055033/BDB055033.sdf
Basic Properties
Compound ID
E3L055033
Internal ID
BDB055033
Molecular formula
C6H11NO4
Molecular weight
161.157000
Exact mass
161.068808
XLogP
-0.1290
TPSA
66.8400
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
11 / 0
Activity summary
IC50 unknown 42000.00000000 nM
1 activity record(s) imported
InChIKey
DHLVDJQBEXVPOQ-UHFFFAOYSA-N
SMILES
CN(C)OC(=O)CCC(=O)O
Aliases
BDBM50395080 (preferred) 4-((Dimethylamino)oxy)-4-oxobutanoic acid (source_name) BDBM50395080 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41229 KDM5C;DXS1272E;JARID1C;SMCX;XE169
Lysine-specific demethylase 5C		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50395080 medium
; target=Lysine-specific demethylase 5C
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50395080 Open - 10.1021/jm300677j PMID: 22724510
PubChem CID71449736 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)OC(=O)CCC(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB055033/BDB055033.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB055033/BDB055033.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB055033/BDB055033.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB055033/BDB055033.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB055033/BDB055033.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Lysine-specific demethylase 5C
P41229
E3 ligase component 		BindingDB:BDBM50395080 IC50 42000 nM Low DOI: 10.1021/jm300677j
PMID: 22724510 		1