< Back to small molecule database

BDBM50401428

E3L055097
Internal ID: BDB055097
Activity data available Local docking-ready structure
Dock with O14965
Structure
/e3_file/ligand_db/generated/BDB055097/BDB055097.sdf
Basic Properties
Compound ID
E3L055097
Internal ID
BDB055097
Molecular formula
C24H28ClN7O
Molecular weight
465.989000
Exact mass
465.204386
XLogP
3.9585
TPSA
77.3200
HBA / HBD
7 / 1
Rotatable bonds
6
Heavy atoms / rings
33 / 5
Activity summary
IC50 unknown 54.00000000 nM
1 activity record(s) imported
InChIKey
RTQTUVNKWOOFQL-UHFFFAOYSA-N
SMILES
Cc1cc(CN2CCN(c3c(Cl)cnc4nc(-c5cccc(CN(C)C)c5)[nH]c34)CC2)no1
Aliases
BDBM50401428 (preferred) 1-[3-[6-chloro-7-[4-[(5-methyl-1,2-oxazol-3-yl)methyl]piperazin-1-yl]-1H-imidazo[4,5-b]pyridin-2-yl]phenyl]-N,N-dimethylmethanamine (source_name) BDBM50401428 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O14965 AURKA;AIK;AIRK1;ARK1;AURA;AYK1;BTAK;IAK1;STK15;STK6
Aurora kinase A
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50401428 medium
; target=Aurora kinase A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50401428 Open - 10.1021/jm300952s PMID: 23043539
PubChem CID71461168 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(CN2CCN(c3c(Cl)cnc4nc(-c5cccc(CN(C)C)c5)[nH]c34)CC2)no1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB055097/BDB055097.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB055097/BDB055097.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB055097/BDB055097.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB055097/BDB055097.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB055097/BDB055097.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Aurora kinase A
O14965
E3 ligase component
BindingDB:BDBM50401428 IC50 54 nM High DOI: 10.1021/jm300952s
PMID: 23043539
1