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BDBM50427920

E3L055713
Internal ID: BDB055713
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB055713/BDB055713.sdf
Basic Properties
Compound ID
E3L055713
Internal ID
BDB055713
Molecular formula
C25H20FN3O3
Molecular weight
429.451000
Exact mass
429.148870
XLogP
3.5612
TPSA
95.0800
HBA / HBD
4 / 3
Rotatable bonds
4
Heavy atoms / rings
32 / 5
Activity summary
IC50 unknown 4810.00000000 nM
1 activity record(s) imported
InChIKey
XVLGMXJEFBHNKQ-GGAORHGYSA-N
SMILES
O=C(N[C@@H]1C[C@H](O)c2ccccc21)c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F
Aliases
BDBM50427920 (preferred) 2-fluoro-N-[(1R,3S)-3-hydroxy-2,3-dihydro-1H-inden-1-yl]-5-[(4-oxo-3H-phthalazin-1-yl)methyl]benzamide (source_name) BDBM50427920 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50427920 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50427920 Open - 10.1021/jm301825t PMID: 23473053
PubChem CID71604871 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(N[C@@H]1C[C@H](O)c2ccccc21)c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB055713/BDB055713.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB055713/BDB055713.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB055713/BDB055713.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB055713/BDB055713.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB055713/BDB055713.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50427920 IC50 4810 nM Low DOI: 10.1021/jm301825t
PMID: 23473053 		1