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N-[2-(4-methyl-1-piperazinyl)-5-nitrophenyl]-2-furamide

E3L055772
Internal ID: BDB055772
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB055772/BDB055772.sdf
Basic Properties
Compound ID
E3L055772
Internal ID
BDB055772
Molecular formula
C16H18N4O4
Molecular weight
330.344000
Exact mass
330.132805
XLogP
2.1919
TPSA
91.8600
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
24 / 3
Activity summary
Kd > 10000.00000000 nM
1 activity record(s) imported
InChIKey
PKNMGNVMKCLCTL-UHFFFAOYSA-N
SMILES
CN1CCN(c2ccc([N+](=O)[O-])cc2NC(=O)c2ccco2)CC1
Aliases
BDBM50428264 (preferred) N-[2-(4-methyl-1-piperazinyl)-5-nitrophenyl]-2-furamide (source_name) BDBM50428264 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50428264 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50428264 Open - 10.1021/ml300467n PMID: 24900672
PubChem CID2965795 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(c2ccc([N+](=O)[O-])cc2NC(=O)c2ccco2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB055772/BDB055772.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB055772/BDB055772.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB055772/BDB055772.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB055772/BDB055772.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB055772/BDB055772.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM50428264 Kd >10000 nM Low DOI: 10.1021/ml300467n
PMID: 24900672 		1