< Back to small molecule database

3-oxo-3,4-dihydro-2H-1,4-benzoxazine-6-carbaldehyde

E3L056178
Internal ID: BDB056178
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB056178/BDB056178.sdf
Basic Properties
Compound ID
E3L056178
Internal ID
BDB056178
Molecular formula
C9H7NO3
Molecular weight
177.159000
Exact mass
177.042593
XLogP
0.8300
TPSA
55.4000
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
13 / 2
Activity summary
Kd unknown 170000.00000000 nM
1 activity record(s) imported
InChIKey
VHKABBARGFUYOF-UHFFFAOYSA-N
SMILES
O=Cc1ccc2c(c1)NC(=O)CO2
Aliases
BDBM50438255 (preferred) 3-oxo-3,4-dihydro-2H-1,4-benzoxazine-6-carbaldehyde (source_name) BDBM50438255 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50438255 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50438255 Open - 10.1016/j.bmcl.2013.06.055 PMID: 23850199
PubChem CID10773638 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=Cc1ccc2c(c1)NC(=O)CO2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB056178/BDB056178.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB056178/BDB056178.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB056178/BDB056178.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB056178/BDB056178.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB056178/BDB056178.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM50438255 Kd 170000 nM Low DOI: 10.1016/j.bmcl.2013.06.055
PMID: 23850199
1