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BDBM50449908

E3L056685
Internal ID: BDB056685
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB056685/BDB056685.sdf
Basic Properties
Compound ID
E3L056685
Internal ID
BDB056685
Molecular formula
C39H49Cl2N5O4
Molecular weight
722.758000
Exact mass
721.316160
XLogP
8.4279
TPSA
97.7100
HBA / HBD
6 / 2
Rotatable bonds
12
Heavy atoms / rings
50 / 5
Activity summary
Ki unknown 10890.00000000 nM
1 activity record(s) imported
InChIKey
ODMAGXZOJNLPBL-XDSPJLLDSA-N
SMILES
CCOc1cc(C(C)(C)C)ccc1C1=N[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1C(=O)N1CCN(CCCCCCC(=O)NO)CC1
Aliases
BDBM50449908 (preferred) 7-[4-[(4R,5S)-2-(4-tert-butyl-2-ethoxyphenyl)-4,5-bis(4-chlorophenyl)-4,5-dihydroimidazole-1-carbonyl]piperazin-1-yl]-N-hydroxyheptanamide (source_name) BDBM50449908 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50449908 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50449908 Open - 10.1021/acs.jmedchem.8b00664 PMID: 30045621
PubChem CID145954811 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCOc1cc(C(C)(C)C)ccc1C1=N[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1C(=O)N1CCN(CCCCCCC(=O)NO)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB056685/BDB056685.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB056685/BDB056685.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB056685/BDB056685.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB056685/BDB056685.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB056685/BDB056685.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50449908 Ki 10890 nM Low DOI: 10.1021/acs.jmedchem.8b00664
PMID: 30045621 		1