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BDBM50459957

E3L057005
Internal ID: BDB057005
Activity data available Local docking-ready structure
Dock with Q15369
Structure
/e3_file/ligand_db/generated/BDB057005/BDB057005.sdf
Basic Properties
Compound ID
E3L057005
Internal ID
BDB057005
Molecular formula
C26H34N4O4S
Molecular weight
498.649000
Exact mass
498.230077
XLogP
2.7336
TPSA
102.8400
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
35 / 4
Activity summary
Kd unknown 1400.00000000 nM
1 activity record(s) imported
InChIKey
UTQIQISFAOFPCJ-ZRCGQRJVSA-N
SMILES
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](N2CCCC2=O)C(C)(C)C)cc1
Aliases
BDBM50459957 (preferred) (2S,4R)-1-[(2S)-3,3-dimethyl-2-(2-oxopyrrolidin-1-yl)butanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide (source_name) BDBM50459957 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q15369 ELOC;TCEB1
Elongin-C		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50459957 medium
; target=Elongin-C
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50459957 Open - 10.1021/acs.jmedchem.7b00675 PMID: 28853884
PubChem CID145988632 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](N2CCCC2=O)C(C)(C)C)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057005/BDB057005.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057005/BDB057005.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057005/BDB057005.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057005/BDB057005.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057005/BDB057005.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Elongin-C
Q15369
E3 ligase component 		BindingDB:BDBM50459957 Kd 1400 nM Low DOI: 10.1021/acs.jmedchem.7b00675
PMID: 28853884 		1