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BDBM50467205

E3L057349
Internal ID: BDB057349
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB057349/BDB057349.sdf
Basic Properties
Compound ID
E3L057349
Internal ID
BDB057349
Molecular formula
C27H21Cl3N2O2
Molecular weight
511.836000
Exact mass
510.066861
XLogP
6.5277
TPSA
56.3300
HBA / HBD
2 / 2
Rotatable bonds
5
Heavy atoms / rings
34 / 5
Activity summary
Kd unknown 500.00000000 nM
1 activity record(s) imported
InChIKey
HHGSWONIEYVVCX-HHHXNRCGSA-N
SMILES
CN1C(=O)C(Cc2ccc(Cl)cc2)=C(c2c[nH]c3cc(Cl)ccc23)[C@]1(O)Cc1ccc(Cl)cc1
Aliases
BDBM50467205 (preferred) (5R)-4-(6-chloro-1H-indol-3-yl)-3,5-bis[(4-chlorophenyl)methyl]-5-hydroxy-1-methylpyrrol-2-one (source_name) BDBM50467205 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50467205 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50467205 Open - 10.1016/j.ejmech.2018.08.099 PMID: 30199707
PubChem CID145979925 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1C(=O)C(Cc2ccc(Cl)cc2)=C(c2c[nH]c3cc(Cl)ccc23)[C@]1(O)Cc1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057349/BDB057349.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057349/BDB057349.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057349/BDB057349.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057349/BDB057349.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057349/BDB057349.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50467205 Kd 500 nM Moderate DOI: 10.1016/j.ejmech.2018.08.099
PMID: 30199707 		1