< Back to small molecule database

BDBM50468625

E3L057414
Internal ID: BDB057414
Activity data available Local docking-ready structure
Dock with P98170
Structure
/e3_file/ligand_db/generated/BDB057414/BDB057414.sdf
Basic Properties
Compound ID
E3L057414
Internal ID
BDB057414
Molecular formula
C12H12ClN3O
Molecular weight
249.701000
Exact mass
249.066890
XLogP
2.4240
TPSA
60.9100
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
17 / 2
Activity summary
IC50 unknown 27300.00000000 nM
1 activity record(s) imported
InChIKey
WKYIUYNBWTZHOU-UHFFFAOYSA-N
SMILES
Cc1nn(C(=O)c2ccc(N)cc2)c(C)c1Cl
Aliases
BDBM50468625 (preferred) (4-Aminophenyl)-(4-chloro-3,5-dimethylpyrazol-1-yl)methanone (source_name) BDBM50468625 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50468625 medium
; target=E3 ubiquitin-protein ligase XIAP
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50468625 Open - 10.1016/j.ejmech.2018.07.002 PMID: 30015078
PubChem CID145991361 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1nn(C(=O)c2ccc(N)cc2)c(C)c1Cl keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057414/BDB057414.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057414/BDB057414.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057414/BDB057414.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057414/BDB057414.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057414/BDB057414.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component
BindingDB:BDBM50468625 IC50 27300 nM Low DOI: 10.1016/j.ejmech.2018.07.002
PMID: 30015078
1