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BDBM50469395

E3L057453
Internal ID: BDB057453
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB057453/BDB057453.sdf
Basic Properties
Compound ID
E3L057453
Internal ID
BDB057453
Molecular formula
C30H28N4O4
Molecular weight
508.578000
Exact mass
508.211055
XLogP
5.0771
TPSA
106.1700
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
38 / 6
Activity summary
EC50 unknown 33.00000000 nM
1 activity record(s) imported
InChIKey
LTNNJWACHBZIFJ-OVVQPSECSA-N
SMILES
CCCc1nc2c(CO)cccc2n1Cc1ccc2c(c1)COc1ccccc1/C2=C(\C)c1noc(=O)[nH]1
Aliases
BDBM50469395 (preferred) 3-[(1E)-1-[8-[[4-(hydroxymethyl)-2-propylbenzimidazol-1-yl]methyl]-6H-benzo[c][1]benzoxepin-11-ylidene]ethyl]-4H-1,2,4-oxadiazol-5-one (source_name) BDBM50469395 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50469395 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50469395 Open - 10.1021/acs.jmedchem.8b01200 PMID: 30351933
PubChem CID145982467 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCc1nc2c(CO)cccc2n1Cc1ccc2c(c1)COc1ccccc1/C2=C(\C)c1noc(=O)[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057453/BDB057453.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057453/BDB057453.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057453/BDB057453.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057453/BDB057453.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057453/BDB057453.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50469395 EC50 33 nM High DOI: 10.1021/acs.jmedchem.8b01200
PMID: 30351933 		1