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BDBM50497337

E3L057837
Internal ID: BDB057837
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB057837/BDB057837.sdf
Basic Properties
Compound ID
E3L057837
Internal ID
BDB057837
Molecular formula
C26H24N4
Molecular weight
392.506000
Exact mass
392.200097
XLogP
6.0035
TPSA
50.7000
HBA / HBD
4 / 1
Rotatable bonds
6
Heavy atoms / rings
30 / 5
Activity summary
IC50 unknown 180.00000000 nM
1 activity record(s) imported
InChIKey
YTFBNZNGGYGAQN-UHFFFAOYSA-N
SMILES
Cc1cnc(-c2ccccc2C2CC2)nc1NCc1ccc(-c2cccnc2)cc1
Aliases
BDBM50497337 (preferred) 2-(2-cyclopropylphenyl)-5-methyl-N-[(4-pyridin-3-ylphenyl)methyl]pyrimidin-4-amine (source_name) BDBM50497337 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50497337 medium
; target=WD repeat-containing protein 48
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50497337 Open - 10.1021/jm5010495 PMID: 25229643
PubChem CID60167892 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cnc(-c2ccccc2C2CC2)nc1NCc1ccc(-c2cccnc2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057837/BDB057837.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057837/BDB057837.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057837/BDB057837.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057837/BDB057837.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057837/BDB057837.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 48
Q8TAF3
E3 ligase component 		BindingDB:BDBM50497337 IC50 180 nM Moderate DOI: 10.1021/jm5010495
PMID: 25229643 		1