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BDBM50497348

E3L057848
Internal ID: BDB057848
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB057848/BDB057848.sdf
Basic Properties
Compound ID
E3L057848
Internal ID
BDB057848
Molecular formula
C27H28N4
Molecular weight
408.549000
Exact mass
408.231397
XLogP
6.5579
TPSA
50.7000
HBA / HBD
4 / 1
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 120.00000000 nM
1 activity record(s) imported
InChIKey
CSOBQKMAXFQFRJ-UHFFFAOYSA-N
SMILES
Cc1nc(-c2ccccc2C(C)C)nc(NCc2ccc(-c3cccnc3)cc2)c1C
Aliases
BDBM50497348 (preferred) 2-(2-Isopropylphenyl)-5,6-dimethyl-N-(4-(pyridin-3-yl)benzyl)pyrimidin-4-amine (source_name) BDBM50497348 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50497348 medium
; target=WD repeat-containing protein 48
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50497348 Open - 10.1021/jm5010495 PMID: 25229643
PubChem CID60167929 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1nc(-c2ccccc2C(C)C)nc(NCc2ccc(-c3cccnc3)cc2)c1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057848/BDB057848.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057848/BDB057848.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057848/BDB057848.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057848/BDB057848.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057848/BDB057848.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 48
Q8TAF3
E3 ligase component 		BindingDB:BDBM50497348 IC50 120 nM Moderate DOI: 10.1021/jm5010495
PMID: 25229643 		1