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BDBM50498661

E3L057880
Internal ID: BDB057880
Activity data available Local docking-ready structure
Dock with P41229
Structure
/e3_file/ligand_db/generated/BDB057880/BDB057880.sdf
Basic Properties
Compound ID
E3L057880
Internal ID
BDB057880
Molecular formula
C13H13N5O3
Molecular weight
287.279000
Exact mass
287.101839
XLogP
0.4415
TPSA
101.2100
HBA / HBD
5 / 1
Rotatable bonds
3
Heavy atoms / rings
21 / 3
Activity summary
IC50 unknown 631.00000000 nM
1 activity record(s) imported
InChIKey
ZWYZYIJWJJUCJE-UHFFFAOYSA-N
SMILES
CC(=O)N1CC(n2cc(-c3cc(C(=O)O)ccn3)nn2)C1
Aliases
BDBM50498661 (preferred) 2-[1-(1-Acetylazetidin-3-yl)triazol-4-yl]pyridine-4-carboxylic acid (source_name) BDBM50498661 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41229 KDM5C;DXS1272E;JARID1C;SMCX;XE169
Lysine-specific demethylase 5C		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50498661 medium
; target=Lysine-specific demethylase 5C
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50498661 Open - 10.1039/C4MD00291A PMID: 26682034
PubChem CID122191467 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)N1CC(n2cc(-c3cc(C(=O)O)ccn3)nn2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057880/BDB057880.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057880/BDB057880.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057880/BDB057880.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057880/BDB057880.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057880/BDB057880.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Lysine-specific demethylase 5C
P41229
E3 ligase component 		BindingDB:BDBM50498661 IC50 631 nM Moderate DOI: 10.1039/C4MD00291A
PMID: 26682034 		1