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BDBM50499823

E3L057954
Internal ID: BDB057954
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB057954/BDB057954.sdf
Basic Properties
Compound ID
E3L057954
Internal ID
BDB057954
Molecular formula
C26H22N6O3
Molecular weight
466.501000
Exact mass
466.175339
XLogP
2.2339
TPSA
126.2100
HBA / HBD
7 / 2
Rotatable bonds
4
Heavy atoms / rings
35 / 5
Activity summary
EC50 unknown 115.00000000 nM
1 activity record(s) imported
InChIKey
XDHIKOVGCSINSB-UHFFFAOYSA-N
SMILES
N#Cc1cccnc1N1CCN(C(=O)c2cccc(C(O)c3n[nH]c(=O)c4ccccc34)c2)CC1
Aliases
BDBM50499823 (preferred) 2-[4-[3-[hydroxy-(4-oxo-3H-phthalazin-1-yl)methyl]benzoyl]piperazin-1-yl]pyridine-3-carbonitrile (source_name) BDBM50499823 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50499823 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50499823 Open - 10.1016/j.bmcl.2015.10.079 PMID: 26546219
PubChem CID127037778 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1cccnc1N1CCN(C(=O)c2cccc(C(O)c3n[nH]c(=O)c4ccccc34)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB057954/BDB057954.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB057954/BDB057954.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB057954/BDB057954.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB057954/BDB057954.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB057954/BDB057954.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50499823 EC50 115 nM Moderate DOI: 10.1016/j.bmcl.2015.10.079
PMID: 26546219 		1