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BDBM50503126

E3L058109
Internal ID: BDB058109
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB058109/BDB058109.sdf
Basic Properties
Compound ID
E3L058109
Internal ID
BDB058109
Molecular formula
C29H23FN4O3
Molecular weight
494.526000
Exact mass
494.175419
XLogP
5.4893
TPSA
85.4200
HBA / HBD
5 / 1
Rotatable bonds
4
Heavy atoms / rings
37 / 7
Activity summary
EC50 unknown 5.30000000 nM
2 activity record(s) imported
InChIKey
LFRNEGDVYOWLIP-WGOQTCKBSA-N
SMILES
C/C(=C1/c2ccc(Cc3c(C4CC4)nc4ccccn34)cc2COc2cc(F)ccc21)c1noc(=O)[nH]1
Aliases
BDBM50503126 (preferred) 3-[(1E)-1-[8-[(2-cyclopropylimidazo[1,2-a]pyridin-3-yl)methyl]-3-fluoro-6H-benzo[c][1]benzoxepin-11-ylidene]ethyl]-4H-1,2,4-oxadiazol-5-one (source_name) BDBM50503126 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50503126 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50503126 Open - 10.1016/j.bmc.2019.115122 PMID: 31623970
PubChem CID136491120 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C/C(=C1/c2ccc(Cc3c(C4CC4)nc4ccccn34)cc2COc2cc(F)ccc21)c1noc(=O)[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB058109/BDB058109.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB058109/BDB058109.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB058109/BDB058109.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB058109/BDB058109.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB058109/BDB058109.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50503126 EC50 5.3 nM Very high DOI: 10.1016/j.bmc.2019.115122
PMID: 31623970 		1
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50503126 EC50 19 nM High DOI: 10.1016/j.bmc.2019.115122
PMID: 31623970 		1