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BDBM50509797

E3L058377
Internal ID: BDB058377
Activity data available Local docking-ready structure
Dock with P12830
Structure
/e3_file/ligand_db/generated/BDB058377/BDB058377.sdf
Basic Properties
Compound ID
E3L058377
Internal ID
BDB058377
Molecular formula
C39H38ClN5O8
Molecular weight
740.213000
Exact mass
739.240891
XLogP
3.9836
TPSA
206.7900
HBA / HBD
6 / 7
Rotatable bonds
17
Heavy atoms / rings
53 / 5
Activity summary
Ki unknown 8900.00000000 nM
1 activity record(s) imported
InChIKey
POAMURKZWBFHRA-PHDGFQFKSA-N
SMILES
O=C(O)CC[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)c1cc2cc(Cl)ccc2[nH]1)C(=O)NCCc1ccccc1
Aliases
BDBM50509797 (preferred) BDBM50509797 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P12830 CDH1;CDHE;UVO
Cadherin-1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50509797 medium
; target=Catenin beta-1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50509797 Open - 10.7270/Q2F194HS
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)CC[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)c1cc2cc(Cl)ccc2[nH]1)C(=O)NCCc1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB058377/BDB058377.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB058377/BDB058377.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB058377/BDB058377.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB058377/BDB058377.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB058377/BDB058377.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Catenin beta-1
P12830
E3 ligase component 		BindingDB:BDBM50509797 Ki 8900 nM Low DOI: 10.7270/Q2F194HS 1