< Back to small molecule database

BDBM50515364

E3L058680
Internal ID: BDB058680
Activity data available Local docking-ready structure
Dock with Q09472
Structure
/e3_file/ligand_db/generated/BDB058680/BDB058680.sdf
Basic Properties
Compound ID
E3L058680
Internal ID
BDB058680
Molecular formula
C23H17N3O5
Molecular weight
415.405000
Exact mass
415.116821
XLogP
4.4797
TPSA
115.3300
HBA / HBD
5 / 1
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 > 10000.00000000 nM
1 activity record(s) imported
InChIKey
OVXZTLKKLDTOPW-UHFFFAOYSA-N
SMILES
Cc1cc(C(=O)c2ccc3c(cnn3-c3ccc(C(=O)O)cc3)c2)c([N+](=O)[O-])cc1C
Aliases
BDBM50515364 (preferred) 4-[5-(4,5-Dimethyl-2-nitrobenzoyl)indazol-1-yl]benzoic acid (source_name) BDBM50515364 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q09472 EP300;P300
Histone acetyltransferase p300		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50515364 medium
; target=Histone acetyltransferase p300
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50515364 Open - 10.1016/j.ejmech.2019.07.026 PMID: 31306905
PubChem CID155554496 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(C(=O)c2ccc3c(cnn3-c3ccc(C(=O)O)cc3)c2)c([N+](=O)[O-])cc1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB058680/BDB058680.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB058680/BDB058680.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB058680/BDB058680.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB058680/BDB058680.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB058680/BDB058680.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase p300
Q09472
E3 ligase component 		BindingDB:BDBM50515364 IC50 >10000 nM Low DOI: 10.1016/j.ejmech.2019.07.026
PMID: 31306905 		1