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BDBM50515612

E3L058705
Internal ID: BDB058705
Activity data available Local docking-ready structure
Dock with O15151 Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB058705/BDB058705.sdf
Basic Properties
Compound ID
E3L058705
Internal ID
BDB058705
Molecular formula
C30H29Cl2N3O5
Molecular weight
582.484000
Exact mass
581.148426
XLogP
6.3663
TPSA
111.7300
HBA / HBD
4 / 3
Rotatable bonds
10
Heavy atoms / rings
40 / 4
Activity summary
Ki unknown 630.00000000 nM
2 activity record(s) imported
InChIKey
WGLOAACVPHQWFB-UHFFFAOYSA-N
SMILES
CC(C)(C)NC(=O)C(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)N(C=O)Cc1ccc(OCc2cccc(Cl)c2)cc1
Aliases
BDBM50515612 (preferred) 3-[2-(tert-butylamino)-1-[[4-[(3-chlorophenyl)methoxy]phenyl]methyl-formylamino]-2-oxoethyl]-6-chloro-1H-indole-2-carboxylic acid (source_name) BDBM50515612 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O15151 MDM4;MDMX
Protein Mdm4		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50515612 medium
; target=Protein Mdm4
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50515612 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50515612 Open - 10.1016/j.ejmech.2019.111588 PMID: 31421630
PubChem CID155564869 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)NC(=O)C(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)N(C=O)Cc1ccc(OCc2cccc(Cl)c2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB058705/BDB058705.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB058705/BDB058705.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB058705/BDB058705.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB058705/BDB058705.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB058705/BDB058705.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50515612 Ki 630 nM Moderate DOI: 10.1016/j.ejmech.2019.111588
PMID: 31421630 		1
Protein Mdm4
O15151
E3 ligase component 		BindingDB:BDBM50515612 Ki 6210 nM Low DOI: 10.1016/j.ejmech.2019.111588
PMID: 31421630 		1