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BDBM50520039

E3L058974
Internal ID: BDB058974
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB058974/BDB058974.sdf
Basic Properties
Compound ID
E3L058974
Internal ID
BDB058974
Molecular formula
C34H29FN8O3
Molecular weight
616.657000
Exact mass
616.234665
XLogP
4.0214
TPSA
132.9900
HBA / HBD
8 / 2
Rotatable bonds
5
Heavy atoms / rings
46 / 8
Activity summary
IC50 unknown 6.20000000 nM
1 activity record(s) imported
InChIKey
RGEGQSNDVNAPBM-UHFFFAOYSA-N
SMILES
O=C(c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCc2c(nc(-c3cccc4[nH]ncc34)nc2N2CCOCC2)C1
Aliases
BDBM50520039 (preferred) 4-[[4-fluoro-3-[2-(1H-indazol-4-yl)-4-morpholin-4-yl-6,8-dihydro-5H-pyrido[3,4-d]pyrimidine-7-carbonyl]phenyl]methyl]-2H-phthalazin-1-one (source_name) BDBM50520039 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50520039 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50520039 Open - 10.1021/acs.jmedchem.9b00622 PMID: 31846325
PubChem CID155546205 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(c1cc(Cc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCc2c(nc(-c3cccc4[nH]ncc34)nc2N2CCOCC2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB058974/BDB058974.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB058974/BDB058974.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB058974/BDB058974.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB058974/BDB058974.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB058974/BDB058974.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50520039 IC50 6.2 nM Very high DOI: 10.1021/acs.jmedchem.9b00622
PMID: 31846325 		1