< Back to small molecule database

BDBM50531092

E3L059570
Internal ID: BDB059570
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB059570/BDB059570.sdf
Basic Properties
Compound ID
E3L059570
Internal ID
BDB059570
Molecular formula
C19H19BrN2O4S
Molecular weight
451.342000
Exact mass
450.024890
XLogP
4.3866
TPSA
110.4200
HBA / HBD
5 / 3
Rotatable bonds
4
Heavy atoms / rings
27 / 3
Activity summary
Kd unknown 229.00000000 nM
2 activity record(s) imported
InChIKey
NJDVFBPUGNOISW-UHFFFAOYSA-N
SMILES
N#CC1(c2ccc(O)c(NS(=O)(=O)c3cc(Br)ccc3O)c2)CCCCC1
Aliases
BDBM50531092 (preferred) 5-bromo-N-[5-(1-cyanocyclohexyl)-2-hydroxyphenyl]-2-hydroxybenzenesulfonamide (source_name) BDBM50531092 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50531092 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50531092 Open - 10.1021/acs.jmedchem.9b01411 PMID: 31724864
PubChem CID155548095 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#CC1(c2ccc(O)c(NS(=O)(=O)c3cc(Br)ccc3O)c2)CCCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB059570/BDB059570.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB059570/BDB059570.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB059570/BDB059570.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB059570/BDB059570.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB059570/BDB059570.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM50531092 Kd 229 nM Moderate DOI: 10.1021/acs.jmedchem.9b01411
PMID: 31724864
2 source records