< Back to small molecule database

BDBM50531111

E3L059589
Internal ID: BDB059589
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB059589/BDB059589.sdf
Basic Properties
Compound ID
E3L059589
Internal ID
BDB059589
Molecular formula
C18H17BrN2O6S2
Molecular weight
501.380000
Exact mass
499.971140
XLogP
3.0099
TPSA
144.5600
HBA / HBD
7 / 3
Rotatable bonds
5
Heavy atoms / rings
29 / 3
Activity summary
Kd unknown 349.00000000 nM
2 activity record(s) imported
InChIKey
ZOQUNXATFSLGSS-UHFFFAOYSA-N
SMILES
CS(=O)(=O)c1cc(C2(C#N)CCC2)cc(NS(=O)(=O)c2cc(Br)ccc2O)c1O
Aliases
BDBM50531111 (preferred) 5-bromo-N-[5-(1-cyanocyclobutyl)-2-hydroxy-3-methylsulfonylphenyl]-2-hydroxybenzenesulfonamide (source_name) BDBM50531111 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50531111 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50531111 Open - 10.1021/acs.jmedchem.9b01411 PMID: 31724864
PubChem CID155531053 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CS(=O)(=O)c1cc(C2(C#N)CCC2)cc(NS(=O)(=O)c2cc(Br)ccc2O)c1O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB059589/BDB059589.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB059589/BDB059589.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB059589/BDB059589.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB059589/BDB059589.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB059589/BDB059589.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM50531111 Kd 349 nM Moderate DOI: 10.1021/acs.jmedchem.9b01411
PMID: 31724864
2 source records