< Back to small molecule database

BDBM50538300

E3L059836
Internal ID: BDB059836
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB059836/BDB059836.sdf
Basic Properties
Compound ID
E3L059836
Internal ID
BDB059836
Molecular formula
C15H15BrClN3O5S
Molecular weight
464.725000
Exact mass
462.960431
XLogP
3.6187
TPSA
121.5200
HBA / HBD
5 / 3
Rotatable bonds
5
Heavy atoms / rings
26 / 3
Activity summary
Kd unknown 700.00000000 nM
1 activity record(s) imported
InChIKey
AWBDBLSUZBKJLN-UHFFFAOYSA-N
SMILES
O=C(O)c1nc(NS(=O)(=O)c2cc(Br)cc(Cl)c2O)cn1C1CCCC1
Aliases
BDBM50538300 (preferred) 4-[(5-Bromo-3-chloro-2-hydroxyphenyl)sulfonylamino]-1-cyclopentylimidazole-2-carboxylic acid (source_name) BDBM50538300 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50538300 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50538300 Open - 10.1021/acs.jmedchem.0c00224 PMID: 32223236
PubChem CID156018573 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)c1nc(NS(=O)(=O)c2cc(Br)cc(Cl)c2O)cn1C1CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB059836/BDB059836.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB059836/BDB059836.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB059836/BDB059836.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB059836/BDB059836.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB059836/BDB059836.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM50538300 Kd 700 nM Moderate DOI: 10.1021/acs.jmedchem.0c00224
PMID: 32223236
1