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BDBM50575269

E3L061177
Internal ID: BDB061177
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB061177/BDB061177.sdf
Basic Properties
Compound ID
E3L061177
Internal ID
BDB061177
Molecular formula
C18H19FN6O3
Molecular weight
386.387000
Exact mass
386.150267
XLogP
1.7854
TPSA
102.6700
HBA / HBD
7 / 2
Rotatable bonds
7
Heavy atoms / rings
28 / 4
Activity summary
IC50 unknown 501.00000000 nM
2 activity record(s) imported
InChIKey
YISNAISNLQBDTP-UHFFFAOYSA-N
SMILES
COCCC(=O)Nc1cnc(NCc2c(F)ccc3c2CCO3)n2cnnc12
Aliases
BDBM50575269 (preferred) N-[5-[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methylamino]-[1,2,4]triazolo[4,3-c]pyrimidin-8-yl]-3-methoxypropanamide (source_name) BDBM50575269 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50575269 medium
; target=Polycomb protein EED
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50575269 Open - 10.1021/acs.jmedchem.1c01161 PMID: 34807608
PubChem CID156340639 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCC(=O)Nc1cnc(NCc2c(F)ccc3c2CCO3)n2cnnc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB061177/BDB061177.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB061177/BDB061177.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB061177/BDB061177.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB061177/BDB061177.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB061177/BDB061177.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM50575269 IC50 501 nM Moderate DOI: 10.1021/acs.jmedchem.1c01161
PMID: 34807608 		1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM50575269 IC50 520 nM Moderate DOI: 10.1021/acs.jmedchem.1c01161
PMID: 34807608 		1