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BDBM50579021

E3L061239
Internal ID: BDB061239
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB061239/BDB061239.sdf
Basic Properties
Compound ID
E3L061239
Internal ID
BDB061239
Molecular formula
C30H17FO8
Molecular weight
524.456000
Exact mass
524.090746
XLogP
5.8619
TPSA
141.3400
HBA / HBD
8 / 4
Rotatable bonds
3
Heavy atoms / rings
39 / 6
Activity summary
IC50 unknown 179.00000000 nM
1 activity record(s) imported
InChIKey
ROGMDIVEUUWXEP-UHFFFAOYSA-N
SMILES
O=c1cc(-c2cccc(-c3c(O)cc(O)c4c(=O)cc(-c5ccc(F)cc5)oc34)c2)oc2cc(O)cc(O)c12
Aliases
BDBM50579021 (preferred) 8-[3-(5,7-Dihydroxy-4-oxochromen-2-yl)phenyl]-2-(4-fluorophenyl)-5,7-dihydroxychromen-4-one (source_name) BDBM50579021 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50579021 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50579021 Open - 10.1021/acs.jmedchem.1c00735 PMID: 34404206
PubChem CID164623682 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=c1cc(-c2cccc(-c3c(O)cc(O)c4c(=O)cc(-c5ccc(F)cc5)oc34)c2)oc2cc(O)cc(O)c12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB061239/BDB061239.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB061239/BDB061239.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB061239/BDB061239.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB061239/BDB061239.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB061239/BDB061239.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50579021 IC50 179 nM Moderate DOI: 10.1021/acs.jmedchem.1c00735
PMID: 34404206 		1