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BDBM50585776

E3L061702
Internal ID: BDB061702
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB061702/BDB061702.sdf
Basic Properties
Compound ID
E3L061702
Internal ID
BDB061702
Molecular formula
C24H31FN6O
Molecular weight
438.551000
Exact mass
438.254338
XLogP
4.2771
TPSA
86.2000
HBA / HBD
7 / 3
Rotatable bonds
6
Heavy atoms / rings
32 / 4
Activity summary
IC50 unknown 784.00000000 nM
1 activity record(s) imported
InChIKey
UZQXPHDZFUAMQS-XMMPIXPASA-N
SMILES
CC(C)Nc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1
Aliases
BDBM50585776 (preferred) (1R)-1-[7-[[5-fluoro-2-(propan-2-ylamino)-4-pyridinyl]amino]-1,6-naphthyridin-2-yl]-1-(1-methylpiperidin-4-yl)ethanol (source_name) BDBM50585776 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50585776 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50585776 Open - 10.1021/acs.jmedchem.1c02069 PMID: 35143203
PubChem CID166627570 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)Nc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB061702/BDB061702.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB061702/BDB061702.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB061702/BDB061702.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB061702/BDB061702.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB061702/BDB061702.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM50585776 IC50 784 nM Moderate DOI: 10.1021/acs.jmedchem.1c02069
PMID: 35143203 		1