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BDBM50592254

E3L061989
Internal ID: BDB061989
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB061989/BDB061989.sdf
Basic Properties
Compound ID
E3L061989
Internal ID
BDB061989
Molecular formula
C19H20N4O4
Molecular weight
368.393000
Exact mass
368.148455
XLogP
2.1789
TPSA
119.4700
HBA / HBD
5 / 3
Rotatable bonds
8
Heavy atoms / rings
27 / 3
Activity summary
IC50 unknown 102.00000000 nM
1 activity record(s) imported
InChIKey
LDVCDHNBOJUNKO-UHFFFAOYSA-N
SMILES
NC(=O)c1cccc2cn(-c3ccc(OCCCCC(=O)NO)cc3)nc12
Aliases
BDBM50592254 (preferred) 2-[4-[5-(Hydroxyamino)-5-oxopentoxy]phenyl]indazole-7-carboxamide (source_name) BDBM50592254 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50592254 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50592254 Open - 10.7270/Q22F7SD8 PMID: 35643262
PubChem CID168275757 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready NC(=O)c1cccc2cn(-c3ccc(OCCCCC(=O)NO)cc3)nc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB061989/BDB061989.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB061989/BDB061989.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB061989/BDB061989.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB061989/BDB061989.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB061989/BDB061989.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50592254 IC50 102 nM Moderate DOI: 10.7270/Q22F7SD8
PMID: 35643262 		1