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BDBM50594799

E3L062218
Internal ID: BDB062218
Activity data available Local docking-ready structure
Dock with Q92630
Structure
/e3_file/ligand_db/generated/BDB062218/BDB062218.sdf
Basic Properties
Compound ID
E3L062218
Internal ID
BDB062218
Molecular formula
C12H10N2O3S
Molecular weight
262.290000
Exact mass
262.041213
XLogP
1.6050
TPSA
59.9200
HBA / HBD
5 / 1
Rotatable bonds
1
Heavy atoms / rings
18 / 3
Activity summary
IC50 unknown 80.00000000 nM
1 activity record(s) imported
InChIKey
HFLXYSRIPKXGOQ-YWEYNIOJSA-N
SMILES
CSC1=N/C(=C\c2ccc3c(c2)OCO3)C(=O)N1
Aliases
BDBM50594799 (preferred) 4-[(Z)-1,3-benzodioxol-5-ylmethylidene]-2-(methylsulfanyl)-1H-imidazol-5-one (source_name) BDBM50594799 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92630 DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50594799 medium
; target=Dual specificity tyrosine-phosphorylation-regulated kinase 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50594799 Open - 10.7270/Q2FN1B7V PMID: 34928152
PubChem CID135787042 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CSC1=N/C(=C\c2ccc3c(c2)OCO3)C(=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062218/BDB062218.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062218/BDB062218.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062218/BDB062218.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062218/BDB062218.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062218/BDB062218.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM50594799 IC50 80 nM High DOI: 10.7270/Q2FN1B7V
PMID: 34928152 		1