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US20230287003, Example 1i

E3L062305
Internal ID: BDB062305
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB062305/BDB062305.sdf
Basic Properties
Compound ID
E3L062305
Internal ID
BDB062305
Molecular formula
C22H20ClN5O2
Molecular weight
421.888000
Exact mass
421.130553
XLogP
4.1752
TPSA
91.9700
HBA / HBD
6 / 2
Rotatable bonds
2
Heavy atoms / rings
30 / 5
Activity summary
IC50 unknown 1600.00000000 nM
2 activity record(s) imported
InChIKey
CPRJDQUHIKJKEF-UHFFFAOYSA-N
SMILES
CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC12CC2
Aliases
BDBM50597107 (preferred) US20230287003, Example 1i (source_name) BDBM50597107 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50597107 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50597107 Open - 10.7270/Q2WQ07TK PMID: 35657291
PubChem CID155758479 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC12CC2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062305/BDB062305.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062305/BDB062305.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062305/BDB062305.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062305/BDB062305.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062305/BDB062305.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM50597107 IC50 1600 nM Low DOI: 10.7270/Q2WQ07TK
PMID: 35657291 		1
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM50597107 IC50 9900 nM Low DOI: 10.7270/Q2WQ07TK
PMID: 35657291 		1