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BDBM50601770

E3L062423
Internal ID: BDB062423
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB062423/BDB062423.sdf
Basic Properties
Compound ID
E3L062423
Internal ID
BDB062423
Molecular formula
C22H24N6O
Molecular weight
388.475000
Exact mass
388.201159
XLogP
2.4404
TPSA
70.0500
HBA / HBD
5 / 1
Rotatable bonds
3
Heavy atoms / rings
29 / 5
Activity summary
IC50 unknown 30.00000000 nM
1 activity record(s) imported
InChIKey
DROQVECQSRMSSA-UHFFFAOYSA-N
SMILES
Cc1cnc(N2CCN(Cc3ccc4c(c3)[nH]c(=O)c3cccnc34)CC2)n1C
Aliases
BDBM50601770 (preferred) 8-[[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]methyl]-6H-benzo[h][1,6]naphthyridin-5-one (source_name) BDBM50601770 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50601770 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50601770 Open - 10.7270/Q2Z03D7J PMID: 34570508
PubChem CID168288984 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cnc(N2CCN(Cc3ccc4c(c3)[nH]c(=O)c3cccnc34)CC2)n1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062423/BDB062423.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062423/BDB062423.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062423/BDB062423.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062423/BDB062423.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062423/BDB062423.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50601770 IC50 30 nM High DOI: 10.7270/Q2Z03D7J
PMID: 34570508 		1