< Back to small molecule database

BDBM50602871

E3L062518
Internal ID: BDB062518
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB062518/BDB062518.sdf
Basic Properties
Compound ID
E3L062518
Internal ID
BDB062518
Molecular formula
C23H21FN4O3
Molecular weight
420.444000
Exact mass
420.159769
XLogP
3.7345
TPSA
88.6300
HBA / HBD
4 / 2
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 14.00000000 nM
1 activity record(s) imported
InChIKey
YPVIZVDRHDFYSG-UHFFFAOYSA-N
SMILES
CC(=O)c1cc(C(=O)Nc2cc(CO)cc(-c3cnn(C)c3)c2F)c2cc(C)ccn12
Aliases
BDBM50602871 (preferred) 3-Acetyl-N-(2-fluoro-5-(hydroxymethyl)-3-(1-methyl-1H-pyrazol-4-yl)phenyl)-7-methylindolizine-1-carboxamide (source_name) BDBM50602871 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50602871 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50602871 Open - 10.7270/Q2VT1X5F PMID: 34962793
PubChem CID154631615 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)c1cc(C(=O)Nc2cc(CO)cc(-c3cnn(C)c3)c2F)c2cc(C)ccn12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062518/BDB062518.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062518/BDB062518.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062518/BDB062518.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062518/BDB062518.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062518/BDB062518.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component
BindingDB:BDBM50602871 IC50 14 nM High DOI: 10.7270/Q2VT1X5F
PMID: 34962793
1