< Back to small molecule database

BDBM50604841

E3L062609
Internal ID: BDB062609
Activity data available Local docking-ready structure
Dock with O15164
Structure
/e3_file/ligand_db/generated/BDB062609/BDB062609.sdf
Basic Properties
Compound ID
E3L062609
Internal ID
BDB062609
Molecular formula
C21H24N2O3S
Molecular weight
384.501000
Exact mass
384.150764
XLogP
4.0540
TPSA
66.4800
HBA / HBD
3 / 1
Rotatable bonds
4
Heavy atoms / rings
27 / 4
Activity summary
IC50 unknown 8940.00000000 nM
1 activity record(s) imported
InChIKey
WTXNATUVOGQGJL-UHFFFAOYSA-N
SMILES
CC(=O)N1CCc2cc(S(=O)(=O)Nc3cccc(C4CCCC4)c3)ccc21
Aliases
BDBM50604841 (preferred) 1-acetyl-N-(3-cyclopentylphenyl)-2,3-dihydroindole-5-sulfonamide (source_name) BDBM50604841 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O15164 TRIM24;RNF82;TIF1;TIF1A
Transcription intermediary factor 1-alpha
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50604841 medium
; target=Transcription intermediary factor 1-alpha
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50604841 Open - 10.7270/Q2SB49VN PMID: 35385803
PubChem CID168296473 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)N1CCc2cc(S(=O)(=O)Nc3cccc(C4CCCC4)c3)ccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062609/BDB062609.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062609/BDB062609.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062609/BDB062609.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062609/BDB062609.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062609/BDB062609.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Transcription intermediary factor 1-alpha
O15164
E3 ligase component
BindingDB:BDBM50604841 IC50 8940 nM Low DOI: 10.7270/Q2SB49VN
PMID: 35385803
1